Sequencing and assembly of multiple Bacteroides sp. genomes for the H... - SRA

SRX006677: Sequencing and assembly of multiple Bacteroides sp. genomes for the HMP Jumpstart project.
1 LS454 (454 GS FLX) run: 138,685 spots, 41.4M bases, 81.1Mb downloads

UUID: f8a306e0-a1bd-43ec-bdac-76e6f9809b5c

Design: 10X fragment; 10X physical paired

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA38769 • SRP002503 • All experiments • All runs

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<b><i>Bacteroides</i> sp. 3_1_13</b>. This strain is from the human gastrointestinal tract. This genome will be used for comparative analysis.

Sample: Generic sample from Bacteroides sp. 3_1_13

SAMN00103198 • SRS004177 • All experiments • All runs

Organism: Bacteroides sp. 3_1_13

Library:

Name: 454-2845

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

barcode

Group tag	Basecalls
	TTCAGGTTC

14 forward reverse

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: Bacterial 454 Assembly

gssr_id: 16659.3

lsid: BROAD:SEQUENCING_SAMPLE:16659.3

material_type: Genomic DNA

project: G2111

work_request: 19206

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-05-22 22:18:45.0	454BaseCaller	2.0.00.22

Runs: 1 run, 138,685 spots, 41.4M bases, 81.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR019001	138,685	41.4M	81.1Mb	2009-07-21

ID:: 6936

SRA

Sequence Read Archive

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